Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27170

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,671,751	+		BPHYT_RS27160	0.51	+0.3
1,671,969	-				+2.1
1,672,102	+				-2.6
1,672,131	+				-0.2
1,672,131	+				+0.6
1,672,161	+				-1.1
1,672,161	+				+0.1
1,672,191	-				-0.3
1,672,239	+		BPHYT_RS27165	0.14	+0.7
1,672,239	+		BPHYT_RS27165	0.14	+0.4
1,672,461	+		BPHYT_RS27165	0.54	+1.4
1,672,461	+		BPHYT_RS27165	0.54	+0.3
1,672,461	+		BPHYT_RS27165	0.54	-1.2
1,672,462	-		BPHYT_RS27165	0.54	-1.3
1,672,592	-		BPHYT_RS27165	0.78	-0.3
1,672,886	+		BPHYT_RS27170	0.10	-0.0
1,673,026	-		BPHYT_RS27170	0.21	-0.9
1,673,043	-		BPHYT_RS27170	0.22	+0.4
1,673,166	-		BPHYT_RS27170	0.32	+0.7
1,673,169	+		BPHYT_RS27170	0.32	+0.3
1,673,796	-		BPHYT_RS27170	0.79	+0.9
1,673,886	-		BPHYT_RS27170	0.86	-0.7
1,673,982	-				-0.1
1,673,982	-				-1.1
1,674,119	-				-0.6
1,674,360	-				+0.1
1,674,747	-		BPHYT_RS27175	0.47	+3.4