Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26980

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,629,624	-		BPHYT_RS26975	0.16	+0.4
1,629,858	+		BPHYT_RS26975	0.47	+0.3
1,630,292	+				-1.1
1,630,293	-				+0.4
1,630,404	+				-0.4
1,630,406	+				-0.7
1,630,500	+				+0.1
1,630,529	+				+0.1
1,630,913	+		BPHYT_RS26980	0.32	+0.8
1,630,962	-		BPHYT_RS26980	0.36	+0.6
1,630,987	-		BPHYT_RS26980	0.38	-1.6
1,631,270	+		BPHYT_RS26980	0.59	-0.1
1,631,321	+		BPHYT_RS26980	0.63	-0.8
1,631,322	-		BPHYT_RS26980	0.63	-3.8
1,631,322	-		BPHYT_RS26980	0.63	-0.1
1,631,427	+		BPHYT_RS26980	0.71	-2.0
1,631,515	+		BPHYT_RS26980	0.78	-2.2
1,631,667	-		BPHYT_RS26980	0.89	+1.2
1,631,790	-				-2.4
1,632,358	+				+0.5
1,632,359	-				-0.8
1,632,564	+				+0.2
1,632,642	+		BPHYT_RS26990	0.16	-0.5