Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26965

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,626,554	+				+0.0
1,626,554	+				+0.9
1,626,856	+		BPHYT_RS26960	0.31	-0.4
1,627,279	+		BPHYT_RS26960	0.78	+0.9
1,627,769	+		BPHYT_RS26965	0.38	+0.4
1,628,212	+				-0.8
1,628,213	-				+1.0
1,628,225	-				-1.9
1,628,286	+		BPHYT_RS26970	0.12	-0.1
1,628,385	+		BPHYT_RS26970	0.19	-0.4
1,628,386	-		BPHYT_RS26970	0.19	-0.4
1,628,467	+		BPHYT_RS26970	0.25	+0.1
1,628,569	+		BPHYT_RS26970	0.32	+1.1
1,628,570	-				+1.1
1,628,706	+		BPHYT_RS26970	0.42	-0.6
1,628,865	-		BPHYT_RS26970	0.54	+2.6