Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26050

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,418,118	-				-0.3
1,418,278	-		BPHYT_RS26045	0.11	+0.5
1,418,278	-		BPHYT_RS26045	0.11	+0.0
1,418,284	-		BPHYT_RS26045	0.12	+0.1
1,419,092	-				-0.1
1,419,092	-				-0.2
1,419,365	-		BPHYT_RS26050	0.24	+0.6
1,419,878	+		BPHYT_RS26050	0.70	+0.0
1,419,879	-		BPHYT_RS26050	0.70	+0.5
1,420,280	+				+0.7
1,420,548	-		BPHYT_RS26055	0.27	-0.0
1,420,584	-		BPHYT_RS26055	0.31	+1.8
1,420,935	-		BPHYT_RS26055	0.62	+0.9