Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25490

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,295,848	-		BPHYT_RS25490	0.12	-0.2
1,295,982	+		BPHYT_RS25490	0.26	+0.4
1,296,035	+		BPHYT_RS25490	0.32	+0.7
1,296,084	+		BPHYT_RS25490	0.37	+1.1
1,296,495	+		BPHYT_RS25490	0.82	+0.1
1,296,498	-		BPHYT_RS25490	0.82	-1.2
1,296,654	+				-1.7
1,297,045	+				+0.6
1,297,046	-				+0.0
1,297,054	+				+0.1
1,297,222	+				-0.3
1,297,234	-		BPHYT_RS25500	0.11	-0.4
1,297,509	-		BPHYT_RS25500	0.53	-1.2
1,297,544	-		BPHYT_RS25500	0.59	-0.9