Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25480

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,293,293	-		BPHYT_RS25475	0.16	-0.9
1,294,151	+				-1.2
1,294,353	+		BPHYT_RS25480	0.18	+0.6
1,294,355	+		BPHYT_RS25480	0.18	+0.1
1,294,508	-		BPHYT_RS25480	0.42	+0.2
1,294,511	+		BPHYT_RS25480	0.43	-0.1
1,294,512	-		BPHYT_RS25480	0.43	+0.1
1,295,848	-		BPHYT_RS25490	0.12	-0.2