Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24730

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,113,911	-		BPHYT_RS24725	0.34	+0.1
1,114,066	+		BPHYT_RS24725	0.51	-0.8
1,114,067	-		BPHYT_RS24725	0.51	+1.5
1,114,086	+		BPHYT_RS24725	0.53	+1.2
1,114,087	-		BPHYT_RS24725	0.53	+0.1
1,114,558	+				+0.2
1,114,624	+				+0.2
1,114,656	-				-0.2
1,114,659	+				-0.7
1,114,884	+		BPHYT_RS24730	0.16	+1.2
1,114,885	-		BPHYT_RS24730	0.16	+0.8
1,114,900	+		BPHYT_RS24730	0.18	+1.2
1,115,242	-		BPHYT_RS24730	0.54	-0.4
1,115,634	+				-0.5