Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS23965

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
940,506	-		BPHYT_RS23960	0.17	+0.1
940,646	-		BPHYT_RS23960	0.30	+1.4
941,800	-		BPHYT_RS23965	0.24	-0.8
942,351	+		BPHYT_RS23965	0.58	-0.4
942,388	+		BPHYT_RS23965	0.61	-1.5
942,568	-		BPHYT_RS23965	0.72	-0.1
942,568	-		BPHYT_RS23965	0.72	-0.2
943,370	+		BPHYT_RS23970	0.34	+1.2
943,371	-		BPHYT_RS23970	0.34	-0.6
943,634	+		BPHYT_RS23970	0.59	-0.0
943,634	+		BPHYT_RS23970	0.59	-0.9