Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS22355

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
570,964	-				+0.0
571,054	+				+0.5
571,143	-				+0.4
571,143	-				+0.6
571,493	+				+0.2
571,494	-				+0.8
571,536	+				-0.0
571,568	+				-0.2
571,922	-				-1.1
572,196	-		BPHYT_RS22355	0.36	-0.8
572,382	-		BPHYT_RS22355	0.63	+1.0
572,627	+				-0.0
572,720	+				+0.8
572,723	+				+1.2
572,724	-				-0.4
572,724	-				-0.3
572,726	-				-2.3
572,796	-				-1.3
572,828	+				+0.2
572,829	-				+0.1
572,872	+				+1.4
572,982	-				+0.0
573,052	-				-1.0
573,541	-		BPHYT_RS22360	0.58	-2.5
573,541	-		BPHYT_RS22360	0.58	-1.0