Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS22320

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
560,277	+				-0.1
560,278	-				-0.6
560,297	+				+0.2
560,345	-				+0.5
560,399	+				-0.1
560,748	+				+1.8
561,161	-		BPHYT_RS22320	0.50	-1.7
561,413	-		BPHYT_RS22320	0.84	+0.0
561,413	-		BPHYT_RS22320	0.84	-0.4
561,440	+		BPHYT_RS22320	0.87	-1.8
561,440	+		BPHYT_RS22320	0.87	-0.5
561,555	+				+0.5
561,728	+				+1.3
562,313	-		BPHYT_RS22325	0.45	-1.3