Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS20705

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
205,263	+		BPHYT_RS20700	0.67	+0.2
206,343	+		BPHYT_RS20705	0.14	-0.8
207,109	+		BPHYT_RS20705	0.59	-0.6
207,109	+		BPHYT_RS20705	0.59	-0.9
207,109	+		BPHYT_RS20705	0.59	+0.0
207,731	+				+0.5
207,933	+		BPHYT_RS20710	0.31	+1.0
207,934	-		BPHYT_RS20710	0.32	-0.2
207,966	+		BPHYT_RS20710	0.40	-0.4
208,242	+				-2.2