Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19270

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
4,323,905	+				-1.8
4,323,906	-		BPHYT_RS19260	0.87	-2.5
4,324,042	+				-0.3
4,324,043	-				+0.8
4,324,043	-				-0.2
4,324,044	+				-0.2
4,324,044	+				-1.8
4,324,044	+				+1.3
4,324,044	+				+0.2
4,324,044	+				-0.4
4,324,045	-				-1.0
4,324,045	-				+1.5
4,324,045	-				+0.9
4,324,045	-				+0.6
4,324,045	-				+1.5
4,324,045	-				-1.1
4,324,049	-				-2.8
4,324,049	-				-0.7
4,324,205	+				-0.6
4,324,318	+				-0.6
4,324,376	+				-1.5
4,324,474	+				-0.8
4,324,543	-				+0.9
4,324,575	-				-1.0
4,324,575	-				+2.2
4,324,603	+		BPHYT_RS19265	0.18	-0.0
4,324,791	-				-0.3
4,324,791	-				-0.2
4,324,889	-		BPHYT_RS19270	0.43	+0.8
4,324,889	-		BPHYT_RS19270	0.43	+0.4
4,324,943	+		BPHYT_RS19270	0.61	+0.6
4,325,059	-				-1.2
4,325,426	+				-0.5
4,325,426	+				-0.2
4,325,495	+				+2.1
4,325,495	+				+0.5
4,325,496	-				+0.2
4,325,496	-				+2.4
4,325,582	+				+1.4
4,325,583	-				-0.0
4,325,591	+				+1.0
4,325,897	+				-0.2
4,326,050	+				-0.1