Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18620

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
4,187,468	+		BPHYT_RS18610	0.88	+0.5
4,187,734	+				-1.0
4,187,735	-				-2.4
4,187,735	-				-1.4
4,187,735	-				-0.3
4,187,783	-				-4.3
4,187,889	+		BPHYT_RS18615	0.20	-1.4
4,188,156	+		BPHYT_RS18615	0.70	-0.7
4,188,159	+		BPHYT_RS18615	0.70	+0.0
4,188,220	-		BPHYT_RS18615	0.81	-0.5
4,188,220	-		BPHYT_RS18615	0.81	-2.7
4,188,248	-		BPHYT_RS18615	0.87	+0.9
4,188,330	-				-0.7
4,188,365	+				-0.4
4,188,367	+				-1.7
4,188,368	-				-1.3
4,188,578	-		BPHYT_RS18620	0.42	-1.4
4,188,578	-		BPHYT_RS18620	0.42	-0.1
4,188,582	-		BPHYT_RS18620	0.42	-2.9
4,188,588	+		BPHYT_RS18620	0.44	-0.1
4,188,592	+		BPHYT_RS18620	0.44	+0.9
4,188,612	-		BPHYT_RS18620	0.48	-0.9
4,188,723	+		BPHYT_RS18620	0.70	-0.1
4,188,724	-		BPHYT_RS18620	0.70	-2.5
4,188,921	-				+0.2
4,188,990	-				+0.6
4,188,995	-				+0.5
4,189,076	+				-1.2
4,189,093	+				+0.4
4,189,093	+				-0.7
4,189,094	-				-0.9
4,189,094	-				-0.2
4,189,122	+				-0.4
4,189,123	-				-0.2
4,189,454	+		BPHYT_RS18625	0.57	+0.1
4,189,455	-		BPHYT_RS18625	0.57	+0.1
4,189,455	-		BPHYT_RS18625	0.57	-2.2
4,189,493	+		BPHYT_RS18625	0.63	-0.5
4,189,493	+		BPHYT_RS18625	0.63	-0.1
4,189,494	-		BPHYT_RS18625	0.63	-0.9
4,189,523	-		BPHYT_RS18625	0.67	+0.3
4,189,523	-		BPHYT_RS18625	0.67	-1.7
4,189,726	-				-1.5