Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17950

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
4,052,574	-		BPHYT_RS17945	0.85	-4.1
4,052,856	-				-0.3
4,054,971	-				-0.7
4,054,971	-				-1.9
4,054,971	-				-0.9
4,054,971	-				-4.0
4,055,010	-				-0.0
4,055,170	-				-1.2
4,055,187	+				-2.3
4,055,187	+				-3.5
4,055,187	+				-0.3
4,055,196	-				-0.4
4,055,196	-				-2.1
4,055,258	-		BPHYT_RS17955	0.14	-1.1
4,055,415	+		BPHYT_RS17955	0.38	-4.1
4,055,487	+		BPHYT_RS17955	0.49	-2.3
4,055,614	-		BPHYT_RS17955	0.68	-0.3
4,055,614	-		BPHYT_RS17955	0.68	-2.1
4,055,659	+		BPHYT_RS17955	0.75	-2.7
4,055,660	-		BPHYT_RS17955	0.75	-0.8
4,055,690	+		BPHYT_RS17955	0.80	-1.1
4,055,691	-		BPHYT_RS17955	0.80	-1.1
4,055,691	-		BPHYT_RS17955	0.80	-1.6
4,055,691	-		BPHYT_RS17955	0.80	-0.5
4,055,691	-		BPHYT_RS17955	0.80	-1.3
4,055,784	-				-1.1
4,055,784	-				-1.7