Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17030

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
3,860,028	+		BPHYT_RS17025	0.35	+0.4
3,860,128	+		BPHYT_RS17025	0.42	-0.8
3,860,563	+		BPHYT_RS17025	0.73	+0.0
3,860,564	-		BPHYT_RS17025	0.73	+0.3
3,860,564	-		BPHYT_RS17025	0.73	-0.2
3,860,587	+		BPHYT_RS17025	0.75	-0.1
3,860,587	+		BPHYT_RS17025	0.75	-1.8
3,860,818	+				+0.6
3,860,941	+				+1.8
3,861,054	+				+0.5
3,861,365	+		BPHYT_RS17030	0.69	+0.9
3,861,515	+				-0.1
3,861,515	+				-0.6
3,861,596	+				+0.4
3,862,047	+		BPHYT_RS17035	0.46	-0.2
3,862,099	-		BPHYT_RS17035	0.52	+0.0
3,862,174	-		BPHYT_RS17035	0.60	-0.6
3,862,178	-		BPHYT_RS17035	0.60	+1.0
3,862,191	+		BPHYT_RS17035	0.62	+0.0
3,862,486	-				-0.6