Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16505

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
3,741,190	+				+0.4
3,741,190	+				-1.4
3,741,337	+		BPHYT_RS16500	0.22	-0.8
3,741,337	+		BPHYT_RS16500	0.22	+0.5
3,741,338	-		BPHYT_RS16500	0.22	-0.3
3,741,628	+		BPHYT_RS16500	0.63	+0.6
3,741,814	+		BPHYT_RS16500	0.89	-0.1
3,741,877	+				+1.4
3,741,878	-				+0.4
3,741,997	+				+2.0
3,741,998	-				+0.5
3,741,998	-				-2.0
3,741,998	-				+0.2
3,741,998	-				+0.3
3,742,505	-		BPHYT_RS16505	0.63	+0.8
3,742,505	-		BPHYT_RS16505	0.63	+0.4
3,742,645	+		BPHYT_RS16505	0.83	-0.4
3,742,692	+				-0.8
3,742,693	-				+0.5
3,742,693	-				+0.6
3,742,756	+				+1.0
3,742,848	+				+0.1
3,742,914	+				-0.2
3,743,161	-		BPHYT_RS16510	0.22	-1.0