Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14585

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
3,321,751	+		BPHYT_RS14580	0.70	-3.1
3,321,752	-		BPHYT_RS14580	0.70	+0.2
3,322,286	-				+0.5
3,322,447	+				+0.0
3,322,452	+				-1.3
3,322,454	+				+2.8
3,322,460	+				+1.0
3,322,651	+				-0.3
3,322,652	-				+0.7
3,322,805	+		BPHYT_RS14585	0.59	+0.7
3,322,830	-		BPHYT_RS14585	0.68	+1.5
3,322,918	+				-0.2
3,323,017	+				-1.2
3,323,017	+				-0.8
3,323,017	+				+1.8
3,323,143	+		BPHYT_RS14590	0.28	-0.4
3,323,144	-		BPHYT_RS14590	0.29	+1.0
3,323,144	-		BPHYT_RS14590	0.29	-0.3
3,323,144	-		BPHYT_RS14590	0.29	+2.3
3,323,448	-				+0.5
3,323,448	-				-0.9
3,323,527	-				-1.5
3,323,608	-				+1.0
3,323,669	+				+0.0
3,323,669	+				+0.2
3,323,669	+				+0.3
3,323,670	-				+0.1
3,323,706	-				-1.0