Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14320

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
3,267,727	-				-1.2
3,268,439	-				+0.0
3,268,552	+				-0.6
3,269,138	-		BPHYT_RS14320	0.27	-2.6
3,269,138	-		BPHYT_RS14320	0.27	-3.5
3,269,180	-		BPHYT_RS14320	0.29	-3.8
3,269,210	-		BPHYT_RS14320	0.31	-2.2
3,269,210	-		BPHYT_RS14320	0.31	-2.6
3,269,399	+		BPHYT_RS14320	0.39	-1.7
3,269,400	-		BPHYT_RS14320	0.39	-1.6
3,269,400	-		BPHYT_RS14320	0.39	-3.7
3,269,508	+		BPHYT_RS14320	0.44	-2.9
3,269,508	+		BPHYT_RS14320	0.44	-3.9
3,269,508	+		BPHYT_RS14320	0.44	-0.0
3,269,508	+				+1.0
3,269,509	-		BPHYT_RS14320	0.44	-2.3
3,269,509	-		BPHYT_RS14320	0.44	-3.3
3,269,539	+		BPHYT_RS14320	0.46	-2.0
3,269,539	+		BPHYT_RS14320	0.46	-3.3
3,269,539	+		BPHYT_RS14320	0.46	-2.5
3,269,540	-		BPHYT_RS14320	0.46	-1.7
3,269,540	-		BPHYT_RS14320	0.46	-0.0
3,269,540	-		BPHYT_RS14320	0.46	-2.0
3,269,873	-		BPHYT_RS14320	0.61	-2.8
3,270,158	-		BPHYT_RS14320	0.74	-3.6
3,270,368	-		BPHYT_RS14320	0.83	-3.8
3,270,368	-		BPHYT_RS14320	0.83	-3.0
3,270,407	-		BPHYT_RS14320	0.85	-5.3
3,270,442	+		BPHYT_RS14320	0.87	-1.0
3,270,443	-		BPHYT_RS14320	0.87	-2.5
3,270,552	-				-4.6
3,270,580	+				-3.1
3,270,581	-				-1.6
3,270,581	-				-4.0
3,270,622	+				-2.3
3,270,622	+				-5.2
3,270,623	-				-2.0
3,270,646	+				-1.6
3,270,646	+				-1.0
3,270,647	-				-0.6
3,270,649	+				-2.8
3,270,656	-				-0.6
3,270,849	+				+0.6