Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13890

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
3,169,818	+				+3.0
3,169,818	+				+0.6
3,169,874	+		BPHYT_RS13885	0.15	-0.6
3,169,875	-		BPHYT_RS13885	0.15	+0.5
3,171,112	-		BPHYT_RS13890	0.43	-0.4
3,171,150	+		BPHYT_RS13890	0.48	-3.6
3,171,354	+		BPHYT_RS13890	0.71	+2.0
3,171,504	+		BPHYT_RS13890	0.88	-2.7
3,171,544	-				-1.7
3,171,631	-				-0.7
3,171,868	+				-2.3