Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12025

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,742,231	-				+0.6
2,742,284	-				+1.2
2,742,403	-				-0.1
2,742,460	+				-0.1
2,742,460	+				-1.5
2,742,467	+				-2.3
2,742,482	+				-0.3
2,742,553	+		BPHYT_RS12025	0.11	+0.4
2,742,562	+		BPHYT_RS12025	0.12	-0.3
2,742,677	-		BPHYT_RS12025	0.24	-1.7
2,742,677	-		BPHYT_RS12025	0.24	-1.3
2,742,677	-		BPHYT_RS12025	0.24	+0.3
2,742,679	+		BPHYT_RS12025	0.24	-3.0
2,742,679	+		BPHYT_RS12025	0.24	-0.7
2,742,679	+		BPHYT_RS12025	0.24	+1.0
2,742,679	+		BPHYT_RS12025	0.24	-1.2
2,742,865	-		BPHYT_RS12025	0.43	-0.4
2,742,973	+		BPHYT_RS12025	0.54	-1.4
2,743,261	+		BPHYT_RS12025	0.84	+0.0
2,743,368	+				-0.6
2,743,571	-		BPHYT_RS12030	0.33	-1.5
2,743,762	+				+1.0
2,743,803	+				-1.0