Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11110

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,523,540	+		BPHYT_RS11105	0.40	-0.3
2,523,544	+		BPHYT_RS11105	0.41	+0.1
2,524,647	+		BPHYT_RS11110	0.10	-0.0
2,524,907	-		BPHYT_RS11110	0.24	-1.2
2,525,252	-		BPHYT_RS11110	0.41	-0.1
2,525,252	-		BPHYT_RS11110	0.41	-1.1
2,525,794	-		BPHYT_RS11110	0.68	-1.5
2,525,878	-		BPHYT_RS11110	0.73	+0.8
2,526,177	+		BPHYT_RS11110	0.88	+0.2
2,526,321	+				-0.3
2,526,429	-				+0.1
2,527,015	-				-1.1
2,527,020	+				+2.0