Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11105

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,522,439	+				+0.3
2,522,439	+				+0.0
2,522,687	-		BPHYT_RS11100	0.41	-1.2
2,523,022	+				-0.4
2,523,251	+		BPHYT_RS11105	0.16	-1.3
2,523,311	+		BPHYT_RS11105	0.21	-1.2
2,523,540	+		BPHYT_RS11105	0.40	-0.3
2,523,544	+		BPHYT_RS11105	0.41	+0.1
2,524,647	+		BPHYT_RS11110	0.10	-0.0
2,524,907	-		BPHYT_RS11110	0.24	-1.2