Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11040

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,506,582	+		BPHYT_RS11035	0.79	-0.6
2,506,792	+				-0.4
2,507,430	-		BPHYT_RS11040	0.62	-3.9
2,507,656	-				-3.2
2,507,656	-				-2.5
2,507,848	+				-0.5
2,508,024	+				+1.0
2,508,109	+		BPHYT_RS11045	0.21	-0.7
2,508,110	-		BPHYT_RS11045	0.21	+0.7
2,508,116	-		BPHYT_RS11045	0.21	-1.3
2,508,243	-		BPHYT_RS11045	0.33	-0.7
2,508,402	+		BPHYT_RS11045	0.47	+0.7
2,508,420	+		BPHYT_RS11045	0.48	-0.3
2,508,420	+		BPHYT_RS11045	0.48	+0.4
2,508,495	+		BPHYT_RS11045	0.55	-0.0
2,508,519	+		BPHYT_RS11045	0.57	+0.3
2,508,520	-		BPHYT_RS11045	0.57	+0.4