Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10840

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,464,792	+		BPHYT_RS10835	0.73	-3.0
2,464,937	-		BPHYT_RS10835	0.77	+0.1
2,465,258	-		BPHYT_RS10835	0.88	-0.7
2,466,262	+				+1.4
2,466,263	-				+1.0
2,466,358	+				-0.4
2,466,592	+		BPHYT_RS10845	0.24	+1.0
2,466,714	-		BPHYT_RS10845	0.32	+1.0
2,466,874	+		BPHYT_RS10845	0.43	+0.0
2,467,153	+		BPHYT_RS10845	0.61	-0.7