Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10815

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,458,325	+		BPHYT_RS10810	0.73	-0.2
2,458,325	+		BPHYT_RS10810	0.73	-1.8
2,458,507	+		BPHYT_RS10810	0.84	+2.7
2,458,773	-				+0.1
2,458,804	-				+0.4
2,458,804	-				-0.8
2,458,919	+		BPHYT_RS10815	0.11	+0.2
2,458,919	+		BPHYT_RS10815	0.11	+1.0
2,459,756	-				+0.5
2,459,774	+				-0.1
2,460,017	+		BPHYT_RS10820	0.24	+1.0
2,460,018	-		BPHYT_RS10820	0.24	-0.6
2,460,288	-		BPHYT_RS10820	0.41	+0.0
2,460,306	-		BPHYT_RS10820	0.42	-0.2
2,460,409	-		BPHYT_RS10820	0.48	-0.7
2,460,449	+		BPHYT_RS10820	0.51	-0.7
2,460,593	+		BPHYT_RS10820	0.60	+0.1