Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10205

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,322,617	+				-1.0
2,322,857	-				+0.4
2,322,930	-				-0.0
2,322,954	-				-0.3
2,323,118	+				-2.0
2,323,119	-				+0.5
2,323,736	+				-1.0
2,324,398	+		BPHYT_RS10205	0.46	+1.8
2,324,721	-		BPHYT_RS10205	0.64	-0.2
2,324,814	-		BPHYT_RS10205	0.69	+1.7
2,325,050	-		BPHYT_RS10205	0.83	+1.0
2,325,050	-		BPHYT_RS10205	0.83	-0.5
2,325,591	-		BPHYT_RS10210	0.11	+0.0