Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09870

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,244,110	-		BPHYT_RS09860	0.65	+0.7
2,245,115	+				+0.5
2,245,115	+				-0.5
2,245,166	-		BPHYT_RS09870	0.11	+2.2
2,245,283	-		BPHYT_RS09870	0.21	+0.5
2,245,503	-		BPHYT_RS09870	0.40	-0.9
2,245,577	+		BPHYT_RS09870	0.46	+1.2
2,245,579	+		BPHYT_RS09870	0.46	+0.4
2,245,823	-		BPHYT_RS09870	0.68	-0.5
2,245,841	-		BPHYT_RS09870	0.69	+1.1
2,246,219	-				-0.6
2,246,947	-		BPHYT_RS09875	0.32	-0.5
2,247,128	-		BPHYT_RS09875	0.45	-0.4