Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09105

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,058,880	+				-1.4
2,058,881	-				+0.2
2,059,010	+				-2.4
2,059,010	+				+2.1
2,059,256	+		BPHYT_RS09100	0.24	-1.4
2,059,256	+		BPHYT_RS09100	0.24	+0.5
2,059,257	-		BPHYT_RS09100	0.24	-0.9
2,059,315	+		BPHYT_RS09100	0.32	+0.1
2,059,316	-		BPHYT_RS09100	0.32	+0.5
2,059,316	-		BPHYT_RS09100	0.32	-1.5
2,060,374	+		BPHYT_RS09105	0.52	-0.2
2,060,375	-		BPHYT_RS09105	0.52	-3.1
2,060,562	+		BPHYT_RS09105	0.70	-0.6
2,060,563	-		BPHYT_RS09105	0.70	-1.4
2,060,630	-		BPHYT_RS09105	0.76	-2.7
2,060,630	-		BPHYT_RS09105	0.76	-1.9
2,060,717	+		BPHYT_RS09105	0.84	-0.6
2,060,717	+		BPHYT_RS09105	0.84	-2.1
2,060,855	+				-2.3