Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08965

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,029,450	-		BPHYT_RS08960	0.66	+1.1
2,029,945	-				+2.7
2,030,204	+				-3.9
2,030,205	-				-0.7
2,030,209	+				-0.7
2,030,209	+				+0.2
2,030,218	-				-1.2
2,030,856	+		BPHYT_RS08965	0.47	+0.6
2,030,857	-		BPHYT_RS08965	0.47	-1.8
2,030,920	-		BPHYT_RS08965	0.52	-2.8
2,031,579	+				-3.8
2,031,864	-				-1.9
2,031,864	-				+0.2
2,031,875	-				-0.5
2,031,875	-				-0.6
2,032,033	+		BPHYT_RS08975	0.33	-2.7
2,032,033	+		BPHYT_RS08975	0.33	-1.9
2,032,034	-		BPHYT_RS08975	0.33	-0.5
2,032,135	+		BPHYT_RS08975	0.54	-1.2
2,032,136	-		BPHYT_RS08975	0.54	-2.9
2,032,196	+		BPHYT_RS08975	0.67	-2.5
2,032,197	-		BPHYT_RS08975	0.67	-2.4
2,032,433	-				+0.1
2,032,433	-				-0.4
2,032,433	-				+1.1
2,032,453	+				-0.1