Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08175

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,868,606	-		BPHYT_RS08170	0.90	-1.4
1,868,647	+				-1.2
1,868,648	-				+0.0
1,868,648	-				+0.0
1,868,648	-				+1.0
1,868,744	+				-0.4
1,869,102	-		BPHYT_RS08175	0.25	-0.3
1,869,312	+		BPHYT_RS08175	0.40	+2.6
1,870,190	+				+1.4
1,870,190	+				+1.2
1,870,190	+				+0.6
1,870,527	+		BPHYT_RS08180	0.19	+0.4
1,870,527	+		BPHYT_RS08180	0.19	+0.1
1,870,527	+		BPHYT_RS08180	0.19	+0.6
1,870,528	-		BPHYT_RS08180	0.19	-0.2
1,871,019	-		BPHYT_RS08180	0.59	+1.4