Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07900

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,797,776	+				+0.1
1,797,776	+				-0.2
1,797,827	+				+2.3
1,797,827	+				-1.4
1,797,959	+				+0.9
1,797,960	-				+0.2
1,798,065	+				-1.3
1,798,067	+				-0.6
1,798,600	-				+0.4
1,798,759	+		BPHYT_RS07900	0.22	+0.4
1,798,767	+		BPHYT_RS07900	0.24	-0.6
1,799,177	+		BPHYT_RS07900	0.87	-3.0
1,799,327	-				-2.5
1,799,327	-				-1.1
1,799,460	+				-0.6
1,799,461	-				-0.8
1,799,490	-				-1.4
1,799,531	-				+3.6
1,799,704	-				+2.1
1,800,185	+				-1.2
1,800,185	+				-0.6
1,800,185	+				-0.5
1,800,185	+				-1.4
1,800,185	+				+0.5
1,800,186	-				+0.9
1,800,186	-				-0.9
1,800,186	-				-1.5
1,800,186	-				-1.9
1,800,186	-				+0.1
1,800,186	-				+0.4
1,800,186	-				-1.4