Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07170

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,626,745	-				-0.5
1,626,997	-		BPHYT_RS07165	0.43	-0.1
1,628,397	-		BPHYT_RS07170	0.46	+0.8
1,629,084	+		BPHYT_RS07170	0.87	+2.0
1,629,084	+		BPHYT_RS07170	0.87	+0.9
1,629,084	+		BPHYT_RS07170	0.87	+0.6
1,629,085	-		BPHYT_RS07170	0.87	+0.6
1,629,090	-		BPHYT_RS07170	0.87	-1.5
1,629,218	-				+0.4
1,629,609	+		BPHYT_RS07175	0.22	-0.6
1,629,610	-		BPHYT_RS07175	0.22	+0.7
1,629,754	-		BPHYT_RS07175	0.32	-0.2
1,629,893	-		BPHYT_RS07175	0.42	+0.7