Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05540

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,271,328	+		BPHYT_RS05535	0.84	+0.3
1,271,329	-		BPHYT_RS05535	0.84	-0.2
1,271,329	-		BPHYT_RS05535	0.84	-0.3
1,271,496	-				-0.1
1,271,496	-				+0.5
1,271,631	+				-0.3
1,271,631	+				-0.1
1,271,632	-				-1.0
1,271,689	-				-1.9
1,271,771	-				-1.4
1,271,771	-				-1.4
1,271,987	+				+0.3
1,271,988	-				+1.5
1,271,988	-				-0.9
1,272,023	+				+0.5
1,272,024	-				+0.9
1,272,033	+				-0.9
1,272,034	-				+0.9
1,272,174	+				-2.2
1,274,021	+				+2.2
1,274,021	+				+0.7
1,274,021	+				-1.8
1,274,028	-				+0.9
1,274,098	-				+0.9