Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05020

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,155,533	-				-0.6
1,156,290	-				-1.9
1,156,634	-		BPHYT_RS05020	0.15	-1.7
1,157,354	-		BPHYT_RS05020	0.64	-0.4
1,157,536	+		BPHYT_RS05020	0.77	+0.7
1,157,696	+		BPHYT_RS05020	0.87	+1.2
1,157,697	-		BPHYT_RS05020	0.88	+3.0
1,157,697	-		BPHYT_RS05020	0.88	+3.0
1,157,697	-		BPHYT_RS05020	0.88	+2.6
1,157,965	-				-2.7
1,157,998	+				+0.4
1,158,182	-				-2.5
1,158,419	+				-0.7
1,158,420	-				-1.4
1,158,420	-				-1.4
1,158,587	+		BPHYT_RS05025	0.13	-1.5
1,158,797	-				+2.5
1,158,857	+		BPHYT_RS05025	0.35	-0.9