Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04795

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,106,661	+		BPHYT_RS04795	0.28	+0.5
1,107,001	-		BPHYT_RS04795	0.51	-0.1
1,107,111	+		BPHYT_RS04795	0.58	-1.9
1,107,111	+		BPHYT_RS04795	0.58	-2.6
1,107,111	+		BPHYT_RS04795	0.58	-0.4
1,107,111	+		BPHYT_RS04795	0.58	+0.2
1,107,287	+		BPHYT_RS04795	0.69	-0.3
1,107,513	+		BPHYT_RS04795	0.84	-2.0
1,107,763	+				-0.9
1,107,763	+				+0.9
1,108,210	+				+0.3
1,108,210	+				-0.7
1,108,211	-				+1.1
1,108,225	+				+0.5
1,108,225	+				-0.0
1,108,225	+				-1.1
1,108,225	+				-2.2