Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS03405

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
767,696	+				-0.3
767,696	+				-0.5
767,696	+				+1.8
767,697	-				+0.3
767,697	-				-1.5
767,697	-				-1.1
767,771	+				-0.8
767,771	+				-0.4
768,288	+		BPHYT_RS03405	0.43	-1.0
768,523	-		BPHYT_RS03405	0.66	-2.3
768,691	+		BPHYT_RS03405	0.81	-3.1
768,810	+				-1.1
768,811	-				-1.2
768,811	-				-0.9
768,849	+				-0.8
768,849	+				-0.7
768,905	+				-0.6
768,959	+				-1.1
768,960	-				-1.9
769,586	-		BPHYT_RS03410	0.44	-0.1