Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS03400

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
764,271	+		BPHYT_RS03395	0.86	-2.0
764,778	+				-0.2
764,864	-				-0.1
764,922	-				+0.1
764,974	-				-0.3
764,974	-				-0.6
765,790	-		BPHYT_RS03400	0.23	-1.7
765,994	-		BPHYT_RS03400	0.31	-2.4
767,696	+				-0.3
767,696	+				-0.5
767,696	+				+1.8
767,697	-				+0.3
767,697	-				-1.5
767,697	-				-1.1
767,771	+				-0.8
767,771	+				-0.4
768,288	+		BPHYT_RS03405	0.43	-1.0
768,523	-		BPHYT_RS03405	0.66	-2.3