Experiment: KLEB28 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24565 and BWI76_RS24570 are separated by 124 nucleotides BWI76_RS24570 and BWI76_RS24575 are separated by 86 nucleotides BWI76_RS24575 and BWI76_RS24580 are separated by 137 nucleotides BWI76_RS24580 and BWI76_RS24585 are separated by 106 nucleotides
BWI76_RS24565: BWI76_RS24565 - mismatch-specific DNA-glycosylase, at 5,121,438 to 5,121,944
_RS24565
BWI76_RS24570: BWI76_RS24570 - tRNA-Met, at 5,122,069 to 5,122,144
_RS24570
BWI76_RS24575: BWI76_RS24575 - hypothetical protein, at 5,122,231 to 5,122,554
_RS24575
BWI76_RS24580: BWI76_RS24580 - PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR, at 5,122,692 to 5,124,605
_RS24580
BWI76_RS24585: BWI76_RS24585 - glycerol dehydrogenase, at 5,124,712 to 5,125,809
_RS24585
Position (kb)
5122
5123
5124
5125 Strain fitness (log2 ratio)
-2
-1
0
1 at 5121.714 kb on + strand, within BWI76_RS24565 at 5121.722 kb on - strand, within BWI76_RS24565 at 5121.835 kb on - strand at 5121.872 kb on + strand, within BWI76_RS24565 at 5121.874 kb on + strand, within BWI76_RS24565 at 5121.874 kb on + strand, within BWI76_RS24565 at 5121.910 kb on + strand at 5121.911 kb on + strand at 5121.918 kb on - strand at 5122.022 kb on - strand at 5122.241 kb on + strand at 5122.404 kb on - strand, within BWI76_RS24575 at 5122.514 kb on - strand, within BWI76_RS24575 at 5122.529 kb on - strand at 5122.565 kb on + strand at 5122.573 kb on - strand at 5122.697 kb on + strand at 5122.708 kb on + strand at 5122.708 kb on + strand at 5122.716 kb on - strand at 5123.022 kb on - strand, within BWI76_RS24580 at 5123.531 kb on + strand, within BWI76_RS24580 at 5123.533 kb on + strand, within BWI76_RS24580 at 5123.536 kb on + strand, within BWI76_RS24580 at 5123.539 kb on - strand, within BWI76_RS24580 at 5123.567 kb on - strand, within BWI76_RS24580 at 5123.978 kb on + strand, within BWI76_RS24580 at 5124.083 kb on + strand, within BWI76_RS24580 at 5124.281 kb on - strand, within BWI76_RS24580 at 5124.332 kb on + strand, within BWI76_RS24580 at 5124.380 kb on + strand, within BWI76_RS24580 at 5124.466 kb on + strand at 5124.569 kb on - strand at 5124.609 kb on - strand at 5124.705 kb on + strand at 5124.713 kb on - strand at 5124.730 kb on - strand at 5124.749 kb on - strand at 5124.798 kb on - strand at 5124.972 kb on + strand, within BWI76_RS24585 at 5125.136 kb on + strand, within BWI76_RS24585 at 5125.429 kb on - strand, within BWI76_RS24585 at 5125.438 kb on + strand, within BWI76_RS24585 at 5125.467 kb on + strand, within BWI76_RS24585
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB28 MOI 0.1 remove 5,121,714 + BWI76_RS24565 0.54 +0.0 5,121,722 - BWI76_RS24565 0.56 -0.4 5,121,835 - +1.3 5,121,872 + BWI76_RS24565 0.86 -0.1 5,121,874 + BWI76_RS24565 0.86 -0.2 5,121,874 + BWI76_RS24565 0.86 -0.1 5,121,910 + +0.4 5,121,911 + +0.0 5,121,918 - +0.1 5,122,022 - -0.3 5,122,241 + +0.2 5,122,404 - BWI76_RS24575 0.53 +0.8 5,122,514 - BWI76_RS24575 0.87 +0.9 5,122,529 - +1.3 5,122,565 + -0.2 5,122,573 - +0.7 5,122,697 + -0.3 5,122,708 + -1.1 5,122,708 + -0.9 5,122,716 - -1.5 5,123,022 - BWI76_RS24580 0.17 -0.6 5,123,531 + BWI76_RS24580 0.44 -1.8 5,123,533 + BWI76_RS24580 0.44 -0.9 5,123,536 + BWI76_RS24580 0.44 -0.2 5,123,539 - BWI76_RS24580 0.44 -0.4 5,123,567 - BWI76_RS24580 0.46 -0.7 5,123,978 + BWI76_RS24580 0.67 -0.7 5,124,083 + BWI76_RS24580 0.73 -0.9 5,124,281 - BWI76_RS24580 0.83 -0.1 5,124,332 + BWI76_RS24580 0.86 -0.7 5,124,380 + BWI76_RS24580 0.88 -0.7 5,124,466 + -0.3 5,124,569 - +0.2 5,124,609 - -0.0 5,124,705 + +0.0 5,124,713 - +0.7 5,124,730 - +0.3 5,124,749 - +0.5 5,124,798 - +0.4 5,124,972 + BWI76_RS24585 0.24 -0.5 5,125,136 + BWI76_RS24585 0.39 +0.2 5,125,429 - BWI76_RS24585 0.65 -0.6 5,125,438 + BWI76_RS24585 0.66 -1.6 5,125,467 + BWI76_RS24585 0.69 +0.6
Or see this region's nucleotide sequence