Experiment: KLEB28 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24325 and BWI76_RS24330 are separated by 152 nucleotides BWI76_RS24330 and BWI76_RS24335 are separated by 151 nucleotides BWI76_RS24335 and BWI76_RS24340 overlap by 4 nucleotides
BWI76_RS24325: BWI76_RS24325 - DNA topoisomerase IV subunit A, at 5,069,377 to 5,071,635
_RS24325
BWI76_RS24330: BWI76_RS24330 - TIGR00156 family protein, at 5,071,788 to 5,072,195
_RS24330
BWI76_RS24335: BWI76_RS24335 - two-component system response regulator QseB, at 5,072,347 to 5,073,006
_RS24335
BWI76_RS24340: BWI76_RS24340 - two-component sensor histidine kinase, at 5,073,003 to 5,074,352
_RS24340
Position (kb)
5071
5072
5073 Strain fitness (log2 ratio)
-1
0
1 at 5071.723 kb on + strand at 5071.731 kb on - strand at 5071.731 kb on - strand at 5071.778 kb on + strand at 5071.875 kb on - strand, within BWI76_RS24330 at 5071.888 kb on - strand, within BWI76_RS24330 at 5071.918 kb on - strand, within BWI76_RS24330 at 5072.137 kb on - strand, within BWI76_RS24330 at 5072.214 kb on - strand at 5072.227 kb on + strand at 5072.227 kb on + strand at 5072.227 kb on + strand at 5072.235 kb on - strand at 5072.235 kb on - strand at 5072.235 kb on - strand at 5072.235 kb on - strand at 5072.440 kb on - strand, within BWI76_RS24335 at 5072.466 kb on + strand, within BWI76_RS24335 at 5072.474 kb on - strand, within BWI76_RS24335 at 5072.474 kb on - strand, within BWI76_RS24335 at 5072.725 kb on - strand, within BWI76_RS24335 at 5072.765 kb on + strand, within BWI76_RS24335 at 5072.907 kb on - strand, within BWI76_RS24335 at 5072.927 kb on + strand, within BWI76_RS24335 at 5072.927 kb on + strand, within BWI76_RS24335 at 5072.979 kb on - strand at 5072.989 kb on + strand at 5072.992 kb on - strand at 5072.992 kb on - strand at 5073.112 kb on + strand at 5073.112 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB28 MOI 0.1 remove 5,071,723 + -0.1 5,071,731 - -0.4 5,071,731 - -0.4 5,071,778 + -0.4 5,071,875 - BWI76_RS24330 0.21 -0.3 5,071,888 - BWI76_RS24330 0.25 -1.4 5,071,918 - BWI76_RS24330 0.32 -1.5 5,072,137 - BWI76_RS24330 0.86 +0.2 5,072,214 - +0.5 5,072,227 + -0.1 5,072,227 + +0.3 5,072,227 + +0.5 5,072,235 - -0.0 5,072,235 - +0.6 5,072,235 - -0.8 5,072,235 - -0.5 5,072,440 - BWI76_RS24335 0.14 +1.3 5,072,466 + BWI76_RS24335 0.18 +0.2 5,072,474 - BWI76_RS24335 0.19 +0.5 5,072,474 - BWI76_RS24335 0.19 +0.5 5,072,725 - BWI76_RS24335 0.57 -0.3 5,072,765 + BWI76_RS24335 0.63 -0.5 5,072,907 - BWI76_RS24335 0.85 +1.6 5,072,927 + BWI76_RS24335 0.88 -0.4 5,072,927 + BWI76_RS24335 0.88 -0.3 5,072,979 - +0.2 5,072,989 + +1.6 5,072,992 - -1.2 5,072,992 - -0.2 5,073,112 + +0.2 5,073,112 - +0.5
Or see this region's nucleotide sequence