Experiment: KLEB28 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20770 and BWI76_RS20775 overlap by 4 nucleotides BWI76_RS20775 and BWI76_RS20780 are separated by 170 nucleotides
BWI76_RS20770: BWI76_RS20770 - reactivating factor for ethanolamine ammonia lyase, at 4,341,070 to 4,342,473
_RS20770
BWI76_RS20775: BWI76_RS20775 - ethanolamine utilization protein EutH, at 4,342,470 to 4,343,702
_RS20775
BWI76_RS20780: BWI76_RS20780 - alcohol dehydrogenase EutG, at 4,343,873 to 4,345,060
_RS20780
Position (kb)
4342
4343
4344 Strain fitness (log2 ratio)
-1
0
1 at 4341.646 kb on - strand, within BWI76_RS20770 at 4341.693 kb on + strand, within BWI76_RS20770 at 4341.907 kb on - strand, within BWI76_RS20770 at 4341.988 kb on - strand, within BWI76_RS20770 at 4342.093 kb on + strand, within BWI76_RS20770 at 4342.241 kb on + strand, within BWI76_RS20770 at 4342.241 kb on + strand, within BWI76_RS20770 at 4342.249 kb on - strand, within BWI76_RS20770 at 4342.395 kb on + strand at 4342.395 kb on + strand at 4342.608 kb on - strand, within BWI76_RS20775 at 4343.138 kb on - strand, within BWI76_RS20775 at 4343.138 kb on - strand, within BWI76_RS20775 at 4343.335 kb on + strand, within BWI76_RS20775 at 4343.343 kb on - strand, within BWI76_RS20775 at 4343.551 kb on - strand, within BWI76_RS20775 at 4343.655 kb on - strand at 4343.675 kb on - strand at 4343.764 kb on + strand at 4343.826 kb on + strand at 4343.859 kb on + strand at 4344.162 kb on + strand, within BWI76_RS20780 at 4344.162 kb on + strand, within BWI76_RS20780 at 4344.170 kb on - strand, within BWI76_RS20780 at 4344.227 kb on + strand, within BWI76_RS20780 at 4344.306 kb on + strand, within BWI76_RS20780 at 4344.398 kb on + strand, within BWI76_RS20780 at 4344.467 kb on + strand, within BWI76_RS20780 at 4344.669 kb on - strand, within BWI76_RS20780 at 4344.669 kb on - strand, within BWI76_RS20780
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB28 MOI 0.1 remove 4,341,646 - BWI76_RS20770 0.41 +1.1 4,341,693 + BWI76_RS20770 0.44 -0.3 4,341,907 - BWI76_RS20770 0.60 +0.1 4,341,988 - BWI76_RS20770 0.65 +0.1 4,342,093 + BWI76_RS20770 0.73 +0.1 4,342,241 + BWI76_RS20770 0.83 +0.5 4,342,241 + BWI76_RS20770 0.83 +0.3 4,342,249 - BWI76_RS20770 0.84 -0.1 4,342,395 + +0.2 4,342,395 + -0.1 4,342,608 - BWI76_RS20775 0.11 -1.0 4,343,138 - BWI76_RS20775 0.54 -0.4 4,343,138 - BWI76_RS20775 0.54 -0.5 4,343,335 + BWI76_RS20775 0.70 -0.6 4,343,343 - BWI76_RS20775 0.71 -0.4 4,343,551 - BWI76_RS20775 0.88 +0.1 4,343,655 - +0.3 4,343,675 - -0.7 4,343,764 + +0.1 4,343,826 + +0.5 4,343,859 + +0.5 4,344,162 + BWI76_RS20780 0.24 -0.2 4,344,162 + BWI76_RS20780 0.24 +0.1 4,344,170 - BWI76_RS20780 0.25 -0.3 4,344,227 + BWI76_RS20780 0.30 +1.1 4,344,306 + BWI76_RS20780 0.36 +0.0 4,344,398 + BWI76_RS20780 0.44 +1.4 4,344,467 + BWI76_RS20780 0.50 +0.1 4,344,669 - BWI76_RS20780 0.67 +0.4 4,344,669 - BWI76_RS20780 0.67 +0.6
Or see this region's nucleotide sequence