Experiment: KLEB28 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19305 and BWI76_RS19310 overlap by 29 nucleotides BWI76_RS19310 and BWI76_RS19315 overlap by 4 nucleotides BWI76_RS19315 and BWI76_RS19320 overlap by 4 nucleotides
BWI76_RS19305: BWI76_RS19305 - ABC transporter ATP-binding protein, at 4,021,466 to 4,022,329
_RS19305
BWI76_RS19310: BWI76_RS19310 - ABC transporter permease, at 4,022,301 to 4,023,206
_RS19310
BWI76_RS19315: BWI76_RS19315 - ABC transporter permease, at 4,023,203 to 4,024,240
_RS19315
BWI76_RS19320: BWI76_RS19320 - putative ABC transport system periplasmic binding protein, at 4,024,237 to 4,025,859
_RS19320
Position (kb) 4023
4024
4025 Strain fitness (log2 ratio) -1
0
1 at 4022.241 kb on - strand, within BWI76_RS19305 at 4022.298 kb on + strand at 4022.546 kb on - strand, within BWI76_RS19310 at 4022.644 kb on - strand, within BWI76_RS19310 at 4023.369 kb on + strand, within BWI76_RS19315 at 4023.410 kb on - strand, within BWI76_RS19315 at 4023.486 kb on + strand, within BWI76_RS19315 at 4023.579 kb on - strand, within BWI76_RS19315 at 4023.784 kb on + strand, within BWI76_RS19315 at 4023.872 kb on + strand, within BWI76_RS19315 at 4024.108 kb on - strand, within BWI76_RS19315 at 4024.165 kb on + strand at 4024.165 kb on + strand at 4024.165 kb on + strand at 4024.225 kb on + strand at 4024.400 kb on - strand, within BWI76_RS19320 at 4024.404 kb on + strand, within BWI76_RS19320 at 4024.504 kb on - strand, within BWI76_RS19320
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB28 MOI 0.1 remove 4,022,241 - BWI76_RS19305 0.90 +0.1 4,022,298 + -0.3 4,022,546 - BWI76_RS19310 0.27 -1.5 4,022,644 - BWI76_RS19310 0.38 -0.2 4,023,369 + BWI76_RS19315 0.16 +0.8 4,023,410 - BWI76_RS19315 0.20 +0.4 4,023,486 + BWI76_RS19315 0.27 +0.2 4,023,579 - BWI76_RS19315 0.36 +0.8 4,023,784 + BWI76_RS19315 0.56 +0.4 4,023,872 + BWI76_RS19315 0.64 +0.5 4,024,108 - BWI76_RS19315 0.87 -0.2 4,024,165 + -0.1 4,024,165 + -1.3 4,024,165 + -0.7 4,024,225 + -0.2 4,024,400 - BWI76_RS19320 0.10 +0.0 4,024,404 + BWI76_RS19320 0.10 +1.0 4,024,504 - BWI76_RS19320 0.16 -0.4
Or see this region's nucleotide sequence