Experiment: KLEB28 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18485 and BWI76_RS18490 are separated by 126 nucleotides BWI76_RS18490 and BWI76_RS18495 overlap by 53 nucleotides BWI76_RS18495 and BWI76_RS18500 are separated by 168 nucleotides
BWI76_RS18485: BWI76_RS18485 - LysR family transcriptional regulator, at 3,833,202 to 3,834,104
_RS18485
BWI76_RS18490: BWI76_RS18490 - cupin, at 3,834,231 to 3,834,638
_RS18490
BWI76_RS18495: BWI76_RS18495 - hypothetical protein, at 3,834,586 to 3,835,530
_RS18495
BWI76_RS18500: BWI76_RS18500 - cation transporting ATPase E1-E2 family protein, at 3,835,699 to 3,838,386
_RS18500
Position (kb)
3834
3835
3836 Strain fitness (log2 ratio)
-1
0
1 at 3833.643 kb on - strand, within BWI76_RS18485 at 3833.758 kb on + strand, within BWI76_RS18485 at 3833.962 kb on - strand, within BWI76_RS18485 at 3833.980 kb on - strand, within BWI76_RS18485 at 3833.995 kb on - strand, within BWI76_RS18485 at 3833.995 kb on - strand, within BWI76_RS18485 at 3834.632 kb on + strand at 3834.632 kb on + strand at 3834.632 kb on + strand at 3834.632 kb on + strand at 3834.680 kb on - strand at 3834.853 kb on - strand, within BWI76_RS18495 at 3834.853 kb on - strand, within BWI76_RS18495 at 3834.894 kb on + strand, within BWI76_RS18495 at 3834.973 kb on - strand, within BWI76_RS18495 at 3835.251 kb on - strand, within BWI76_RS18495 at 3835.336 kb on - strand, within BWI76_RS18495 at 3835.413 kb on - strand, within BWI76_RS18495 at 3835.450 kb on - strand at 3835.629 kb on - strand at 3835.696 kb on + strand at 3835.704 kb on - strand at 3835.755 kb on + strand at 3835.779 kb on + strand at 3835.874 kb on - strand at 3835.965 kb on - strand at 3836.115 kb on + strand, within BWI76_RS18500 at 3836.123 kb on - strand, within BWI76_RS18500 at 3836.228 kb on - strand, within BWI76_RS18500 at 3836.367 kb on - strand, within BWI76_RS18500 at 3836.432 kb on - strand, within BWI76_RS18500 at 3836.505 kb on + strand, within BWI76_RS18500 at 3836.513 kb on - strand, within BWI76_RS18500
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB28 MOI 0.1 remove 3,833,643 - BWI76_RS18485 0.49 +0.2 3,833,758 + BWI76_RS18485 0.62 -0.8 3,833,962 - BWI76_RS18485 0.84 -0.2 3,833,980 - BWI76_RS18485 0.86 -0.1 3,833,995 - BWI76_RS18485 0.88 -0.3 3,833,995 - BWI76_RS18485 0.88 -0.2 3,834,632 + +0.7 3,834,632 + +0.1 3,834,632 + +0.2 3,834,632 + -0.4 3,834,680 - +0.0 3,834,853 - BWI76_RS18495 0.28 +0.0 3,834,853 - BWI76_RS18495 0.28 +0.3 3,834,894 + BWI76_RS18495 0.33 +0.7 3,834,973 - BWI76_RS18495 0.41 -0.0 3,835,251 - BWI76_RS18495 0.70 +0.6 3,835,336 - BWI76_RS18495 0.79 +0.5 3,835,413 - BWI76_RS18495 0.88 +0.6 3,835,450 - +0.1 3,835,629 - -0.5 3,835,696 + +0.4 3,835,704 - -0.2 3,835,755 + -0.4 3,835,779 + -0.3 3,835,874 - +0.0 3,835,965 - -0.6 3,836,115 + BWI76_RS18500 0.15 +0.0 3,836,123 - BWI76_RS18500 0.16 +0.6 3,836,228 - BWI76_RS18500 0.20 +0.4 3,836,367 - BWI76_RS18500 0.25 -0.3 3,836,432 - BWI76_RS18500 0.27 -0.0 3,836,505 + BWI76_RS18500 0.30 +0.0 3,836,513 - BWI76_RS18500 0.30 -0.3
Or see this region's nucleotide sequence