Experiment: KLEB28 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17905 and BWI76_RS17910 are separated by 106 nucleotides BWI76_RS17910 and BWI76_RS17915 are separated by 96 nucleotides BWI76_RS17915 and BWI76_RS17920 are separated by 3 nucleotides BWI76_RS17920 and BWI76_RS17925 are separated by 60 nucleotides
BWI76_RS17905: BWI76_RS17905 - hypothetical protein, at 3,724,326 to 3,724,784
_RS17905
BWI76_RS17910: BWI76_RS17910 - hypothetical protein, at 3,724,891 to 3,725,112
_RS17910
BWI76_RS17915: BWI76_RS17915 - membrane protein, at 3,725,209 to 3,725,775
_RS17915
BWI76_RS17920: BWI76_RS17920 - 23S rRNA (guanine(745)-N(1))-methyltransferase, at 3,725,779 to 3,726,573
_RS17920
BWI76_RS17925: BWI76_RS17925 - peptidoglycan synthase, at 3,726,634 to 3,728,379
_RS17925
Position (kb)
3725
3726
3727 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3724.801 kb on + strand at 3724.806 kb on + strand at 3724.806 kb on + strand at 3724.806 kb on + strand at 3724.806 kb on + strand at 3724.835 kb on - strand at 3724.840 kb on - strand at 3724.980 kb on + strand, within BWI76_RS17910 at 3725.035 kb on - strand, within BWI76_RS17910 at 3725.063 kb on - strand, within BWI76_RS17910 at 3725.069 kb on + strand, within BWI76_RS17910 at 3725.074 kb on + strand, within BWI76_RS17910 at 3725.077 kb on - strand, within BWI76_RS17910 at 3725.077 kb on - strand, within BWI76_RS17910 at 3725.077 kb on - strand, within BWI76_RS17910 at 3725.089 kb on + strand, within BWI76_RS17910 at 3725.099 kb on + strand at 3725.099 kb on + strand at 3725.108 kb on - strand at 3725.109 kb on - strand at 3725.110 kb on + strand at 3725.118 kb on - strand at 3725.118 kb on - strand at 3725.189 kb on + strand at 3725.326 kb on + strand, within BWI76_RS17915 at 3725.334 kb on - strand, within BWI76_RS17915 at 3725.334 kb on - strand, within BWI76_RS17915 at 3725.576 kb on + strand, within BWI76_RS17915 at 3725.623 kb on + strand, within BWI76_RS17915 at 3725.631 kb on - strand, within BWI76_RS17915 at 3725.728 kb on - strand at 3725.743 kb on + strand at 3725.926 kb on - strand, within BWI76_RS17920 at 3725.979 kb on + strand, within BWI76_RS17920 at 3726.603 kb on + strand at 3726.611 kb on - strand at 3726.993 kb on - strand, within BWI76_RS17925 at 3727.153 kb on + strand, within BWI76_RS17925 at 3727.353 kb on + strand, within BWI76_RS17925 at 3727.368 kb on - strand, within BWI76_RS17925
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB28 MOI 0.1 remove 3,724,801 + +0.4 3,724,806 + +0.0 3,724,806 + -0.2 3,724,806 + +0.1 3,724,806 + -2.9 3,724,835 - +0.6 3,724,840 - -0.9 3,724,980 + BWI76_RS17910 0.40 +0.3 3,725,035 - BWI76_RS17910 0.65 +0.9 3,725,063 - BWI76_RS17910 0.77 +1.1 3,725,069 + BWI76_RS17910 0.80 +0.0 3,725,074 + BWI76_RS17910 0.82 +0.6 3,725,077 - BWI76_RS17910 0.84 -0.4 3,725,077 - BWI76_RS17910 0.84 -1.5 3,725,077 - BWI76_RS17910 0.84 -0.0 3,725,089 + BWI76_RS17910 0.89 +0.4 3,725,099 + -0.7 3,725,099 + +0.3 3,725,108 - -0.4 3,725,109 - -0.8 3,725,110 + +0.0 3,725,118 - -0.0 3,725,118 - -0.4 3,725,189 + -0.6 3,725,326 + BWI76_RS17915 0.21 +0.3 3,725,334 - BWI76_RS17915 0.22 +0.7 3,725,334 - BWI76_RS17915 0.22 +0.1 3,725,576 + BWI76_RS17915 0.65 +0.2 3,725,623 + BWI76_RS17915 0.73 +0.7 3,725,631 - BWI76_RS17915 0.74 -0.1 3,725,728 - -0.0 3,725,743 + -1.1 3,725,926 - BWI76_RS17920 0.18 -0.3 3,725,979 + BWI76_RS17920 0.25 -1.6 3,726,603 + +0.7 3,726,611 - -0.1 3,726,993 - BWI76_RS17925 0.21 -0.9 3,727,153 + BWI76_RS17925 0.30 -1.4 3,727,353 + BWI76_RS17925 0.41 +0.0 3,727,368 - BWI76_RS17925 0.42 -0.2
Or see this region's nucleotide sequence