Experiment: KLEB28 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06105 and BWI76_RS06110 are separated by 18 nucleotides BWI76_RS06110 and BWI76_RS06115 overlap by 4 nucleotides BWI76_RS06115 and BWI76_RS06120 are separated by 255 nucleotides BWI76_RS06120 and BWI76_RS06125 are separated by 151 nucleotides
BWI76_RS06105: BWI76_RS06105 - microcin B17 transporter, at 1,283,610 to 1,284,830
_RS06105
BWI76_RS06110: BWI76_RS06110 - hypothetical protein, at 1,284,849 to 1,285,955
_RS06110
BWI76_RS06115: BWI76_RS06115 - membrane protein, at 1,285,952 to 1,286,254
_RS06115
BWI76_RS06120: BWI76_RS06120 - membrane protein, at 1,286,510 to 1,286,713
_RS06120
BWI76_RS06125: BWI76_RS06125 - D-alanine--D-alanine ligase A, at 1,286,865 to 1,287,962
_RS06125
Position (kb)
1284
1285
1286 Strain fitness (log2 ratio)
-1
0
1 at 1283.963 kb on + strand, within BWI76_RS06105 at 1284.006 kb on - strand, within BWI76_RS06105 at 1284.006 kb on - strand, within BWI76_RS06105 at 1284.064 kb on - strand, within BWI76_RS06105 at 1284.210 kb on + strand, within BWI76_RS06105 at 1284.389 kb on + strand, within BWI76_RS06105 at 1284.402 kb on - strand, within BWI76_RS06105 at 1284.461 kb on - strand, within BWI76_RS06105 at 1284.466 kb on - strand, within BWI76_RS06105 at 1284.510 kb on - strand, within BWI76_RS06105 at 1284.512 kb on + strand, within BWI76_RS06105 at 1284.660 kb on - strand, within BWI76_RS06105 at 1284.722 kb on + strand at 1284.780 kb on - strand at 1284.793 kb on + strand at 1284.840 kb on + strand at 1285.266 kb on + strand, within BWI76_RS06110 at 1285.266 kb on + strand, within BWI76_RS06110 at 1285.266 kb on + strand, within BWI76_RS06110 at 1285.266 kb on + strand, within BWI76_RS06110 at 1285.274 kb on - strand, within BWI76_RS06110 at 1285.482 kb on + strand, within BWI76_RS06110 at 1285.944 kb on - strand at 1286.548 kb on - strand, within BWI76_RS06120 at 1286.553 kb on - strand, within BWI76_RS06120 at 1286.766 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB28 MOI 0.1 remove 1,283,963 + BWI76_RS06105 0.29 -0.4 1,284,006 - BWI76_RS06105 0.32 +0.3 1,284,006 - BWI76_RS06105 0.32 -0.1 1,284,064 - BWI76_RS06105 0.37 -0.4 1,284,210 + BWI76_RS06105 0.49 +0.1 1,284,389 + BWI76_RS06105 0.64 +0.5 1,284,402 - BWI76_RS06105 0.65 -0.8 1,284,461 - BWI76_RS06105 0.70 -0.6 1,284,466 - BWI76_RS06105 0.70 -0.6 1,284,510 - BWI76_RS06105 0.74 -0.6 1,284,512 + BWI76_RS06105 0.74 -0.1 1,284,660 - BWI76_RS06105 0.86 +0.3 1,284,722 + -0.3 1,284,780 - +0.1 1,284,793 + -0.5 1,284,840 + -1.6 1,285,266 + BWI76_RS06110 0.38 -0.2 1,285,266 + BWI76_RS06110 0.38 -0.2 1,285,266 + BWI76_RS06110 0.38 -1.3 1,285,266 + BWI76_RS06110 0.38 -0.5 1,285,274 - BWI76_RS06110 0.38 +0.2 1,285,482 + BWI76_RS06110 0.57 -1.4 1,285,944 - -0.6 1,286,548 - BWI76_RS06120 0.19 -0.6 1,286,553 - BWI76_RS06120 0.21 -1.2 1,286,766 + +0.0
Or see this region's nucleotide sequence