Experiment: KLEB28 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04595 and BWI76_RS04600 are separated by 128 nucleotides BWI76_RS04600 and BWI76_RS04605 overlap by 14 nucleotides BWI76_RS04605 and BWI76_RS04610 overlap by 17 nucleotides
BWI76_RS04595: BWI76_RS04595 - DNA-binding transcriptional regulator AraC, at 956,778 to 957,623
_RS04595
BWI76_RS04600: BWI76_RS04600 - inner membrane protein, at 957,752 to 958,519
_RS04600
BWI76_RS04605: BWI76_RS04605 - thiamine ABC transporter ATP-binding protein, at 958,506 to 959,207
_RS04605
BWI76_RS04610: BWI76_RS04610 - thiamine/thiamine pyrophosphate ABC transporter permease ThiP, at 959,191 to 960,801
_RS04610
Position (kb) 957
958
959 Strain fitness (log2 ratio) -1
0
1 at 956.908 kb on + strand, within BWI76_RS04595 at 956.916 kb on - strand, within BWI76_RS04595 at 956.921 kb on - strand, within BWI76_RS04595 at 956.966 kb on + strand, within BWI76_RS04595 at 957.063 kb on + strand, within BWI76_RS04595 at 957.197 kb on - strand, within BWI76_RS04595 at 957.217 kb on + strand, within BWI76_RS04595 at 957.225 kb on - strand, within BWI76_RS04595 at 957.302 kb on + strand, within BWI76_RS04595 at 957.487 kb on - strand, within BWI76_RS04595 at 957.491 kb on + strand, within BWI76_RS04595 at 957.710 kb on - strand at 957.711 kb on + strand at 957.882 kb on + strand, within BWI76_RS04600 at 957.910 kb on + strand, within BWI76_RS04600 at 958.400 kb on + strand, within BWI76_RS04600 at 958.852 kb on + strand, within BWI76_RS04605 at 959.409 kb on - strand, within BWI76_RS04610 at 959.490 kb on + strand, within BWI76_RS04610
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB28 MOI 0.1 remove 956,908 + BWI76_RS04595 0.15 +0.3 956,916 - BWI76_RS04595 0.16 -0.2 956,921 - BWI76_RS04595 0.17 -0.4 956,966 + BWI76_RS04595 0.22 -0.3 957,063 + BWI76_RS04595 0.34 +0.7 957,197 - BWI76_RS04595 0.50 +1.4 957,217 + BWI76_RS04595 0.52 -1.0 957,225 - BWI76_RS04595 0.53 -0.2 957,302 + BWI76_RS04595 0.62 +0.5 957,487 - BWI76_RS04595 0.84 -0.2 957,491 + BWI76_RS04595 0.84 -0.7 957,710 - +0.6 957,711 + -0.1 957,882 + BWI76_RS04600 0.17 -1.4 957,910 + BWI76_RS04600 0.21 -0.1 958,400 + BWI76_RS04600 0.84 -0.1 958,852 + BWI76_RS04605 0.49 +0.1 959,409 - BWI76_RS04610 0.14 -0.8 959,490 + BWI76_RS04610 0.19 -0.3
Or see this region's nucleotide sequence