Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24505
Experiment: KLEB28 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB28 MOI 1 |
---|---|---|---|---|---|
remove | |||||
5,108,396 | - | BWI76_RS24495 | 0.26 | +0.5 | |
5,108,498 | - | BWI76_RS24495 | 0.39 | -0.9 | |
5,108,527 | + | BWI76_RS24495 | 0.42 | +1.6 | |
5,108,603 | + | BWI76_RS24495 | 0.51 | +0.6 | |
5,108,628 | - | BWI76_RS24495 | 0.54 | +0.2 | |
5,108,693 | + | BWI76_RS24495 | 0.62 | +1.0 | |
5,108,772 | - | BWI76_RS24495 | 0.72 | -0.3 | |
5,108,837 | - | BWI76_RS24495 | 0.80 | +0.0 | |
5,108,999 | + | +0.4 | |||
5,109,225 | - | BWI76_RS24500 | 0.70 | +0.5 | |
5,109,246 | + | BWI76_RS24500 | 0.77 | +1.0 | |
5,109,264 | - | BWI76_RS24500 | 0.83 | -0.6 | |
5,109,279 | + | BWI76_RS24500 | 0.87 | -0.2 | |
5,109,365 | + | BWI76_RS24505 | 0.12 | -0.8 | |
5,109,613 | + | BWI76_RS24505 | 0.89 | -0.6 | |
5,110,422 | - | BWI76_RS24510 | 0.46 | +0.2 | |
5,110,539 | + | BWI76_RS24510 | 0.53 | +0.2 | |
5,110,552 | - | BWI76_RS24510 | 0.54 | +0.0 | |
5,110,572 | + | BWI76_RS24510 | 0.55 | +0.2 | |
5,110,631 | - | BWI76_RS24510 | 0.58 | +1.0 |
Or see this region's nucleotide sequence