Experiment: KLEB28 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23115 and BWI76_RS23120 are separated by 10 nucleotides BWI76_RS23120 and BWI76_RS23125 are separated by 14 nucleotides BWI76_RS23125 and BWI76_RS23130 are separated by 15 nucleotides
BWI76_RS23115: BWI76_RS23115 - propanediol dehydratase large subunit, at 4,818,711 to 4,820,375
_RS23115
BWI76_RS23120: BWI76_RS23120 - propanediol dehydratase medium subunit, at 4,820,386 to 4,821,045
_RS23120
BWI76_RS23125: BWI76_RS23125 - propanediol dehydratase small subunit, at 4,821,060 to 4,821,581
_RS23125
BWI76_RS23130: BWI76_RS23130 - diol dehydratase reactivase subunit alpha, at 4,821,597 to 4,823,429
_RS23130
Position (kb)
4820
4821
4822 Strain fitness (log2 ratio)
-1
0
1 at 4819.647 kb on - strand, within BWI76_RS23115 at 4819.728 kb on - strand, within BWI76_RS23115 at 4820.086 kb on - strand, within BWI76_RS23115 at 4820.093 kb on + strand, within BWI76_RS23115 at 4820.174 kb on - strand, within BWI76_RS23115 at 4820.192 kb on + strand, within BWI76_RS23115 at 4820.222 kb on - strand at 4820.350 kb on + strand at 4820.352 kb on + strand at 4820.458 kb on - strand, within BWI76_RS23120 at 4820.851 kb on + strand, within BWI76_RS23120 at 4820.920 kb on + strand, within BWI76_RS23120 at 4821.096 kb on + strand at 4821.290 kb on + strand, within BWI76_RS23125 at 4821.448 kb on - strand, within BWI76_RS23125 at 4821.582 kb on + strand at 4821.919 kb on + strand, within BWI76_RS23130 at 4821.951 kb on - strand, within BWI76_RS23130
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB28 MOI 1 remove 4,819,647 - BWI76_RS23115 0.56 -0.1 4,819,728 - BWI76_RS23115 0.61 -0.2 4,820,086 - BWI76_RS23115 0.83 +0.8 4,820,093 + BWI76_RS23115 0.83 -0.5 4,820,174 - BWI76_RS23115 0.88 -0.2 4,820,192 + BWI76_RS23115 0.89 +0.4 4,820,222 - +0.7 4,820,350 + +0.1 4,820,352 + +0.3 4,820,458 - BWI76_RS23120 0.11 -1.0 4,820,851 + BWI76_RS23120 0.70 +0.6 4,820,920 + BWI76_RS23120 0.81 -0.5 4,821,096 + -0.3 4,821,290 + BWI76_RS23125 0.44 +0.2 4,821,448 - BWI76_RS23125 0.74 +0.1 4,821,582 + +0.4 4,821,919 + BWI76_RS23130 0.18 -0.6 4,821,951 - BWI76_RS23130 0.19 +0.4
Or see this region's nucleotide sequence