Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07500
Experiment: KLEB28 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB28 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,583,675 | - | BWI76_RS07495 | 0.69 | +0.1 | |
1,583,697 | - | BWI76_RS07495 | 0.70 | +0.0 | |
1,584,078 | - | BWI76_RS07495 | 0.84 | +0.4 | |
1,584,085 | - | BWI76_RS07495 | 0.84 | +0.2 | |
1,584,258 | + | -0.1 | |||
1,584,258 | - | -0.2 | |||
1,584,309 | + | -0.5 | |||
1,584,309 | + | -2.2 | |||
1,584,317 | - | +0.0 | |||
1,584,674 | + | -0.6 | |||
1,584,760 | - | BWI76_RS07500 | 0.15 | -0.4 | |
1,584,862 | + | BWI76_RS07500 | 0.25 | -0.4 | |
1,584,862 | + | BWI76_RS07500 | 0.25 | -1.7 | |
1,584,901 | - | BWI76_RS07500 | 0.28 | -0.7 | |
1,585,379 | + | BWI76_RS07500 | 0.72 | -0.4 | |
1,585,525 | + | BWI76_RS07500 | 0.86 | -0.7 | |
1,585,608 | - | +0.6 | |||
1,585,735 | - | -0.1 | |||
1,585,739 | + | -0.9 | |||
1,585,771 | + | -0.0 | |||
1,585,967 | - | +0.1 | |||
1,586,131 | - | BWI76_RS07505 | 0.14 | -0.4 | |
1,586,406 | - | BWI76_RS07505 | 0.23 | +0.5 |
Or see this region's nucleotide sequence