Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19090

Experiment: KLEB28 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB28 MOI 1
3,964,212	-		BWI76_RS19080	0.76	-0.2
3,964,263	-		BWI76_RS19080	0.78	-0.2
3,964,263	-		BWI76_RS19080	0.78	-0.2
3,964,277	-		BWI76_RS19080	0.79	-0.4
3,964,277	-		BWI76_RS19080	0.79	-0.8
3,964,277	-		BWI76_RS19080	0.79	-0.2
3,964,277	-		BWI76_RS19080	0.79	-0.1
3,964,341	-		BWI76_RS19080	0.82	-0.1
3,964,362	-		BWI76_RS19080	0.83	-0.6
3,964,363	+		BWI76_RS19080	0.83	-0.6
3,964,376	-		BWI76_RS19080	0.83	-0.4
3,964,377	-		BWI76_RS19080	0.83	-0.5
3,964,377	-		BWI76_RS19080	0.83	-0.9
3,964,377	-		BWI76_RS19080	0.83	-0.4
3,964,406	-		BWI76_RS19080	0.85	-0.4
3,964,408	+		BWI76_RS19080	0.85	+1.0
3,964,416	-		BWI76_RS19080	0.85	-0.3
3,964,416	-		BWI76_RS19080	0.85	-0.7
3,964,416	-		BWI76_RS19080	0.85	+0.0
3,964,416	-		BWI76_RS19080	0.85	-1.4
3,964,416	-		BWI76_RS19080	0.85	-1.1
3,964,416	-		BWI76_RS19080	0.85	+1.3
3,964,416	-		BWI76_RS19080	0.85	-0.7
3,964,416	-		BWI76_RS19080	0.85	-0.9
3,964,416	-		BWI76_RS19080	0.85	-1.2
3,964,416	-		BWI76_RS19080	0.85	+0.3
3,964,416	-		BWI76_RS19080	0.85	-0.6
3,964,416	-		BWI76_RS19080	0.85	-1.9
3,964,430	-		BWI76_RS19080	0.86	+0.1
3,964,430	-		BWI76_RS19080	0.86	+0.8
3,964,440	-		BWI76_RS19080	0.86	-0.5
3,964,440	-		BWI76_RS19080	0.86	-0.1
3,964,440	-		BWI76_RS19080	0.86	-0.7
3,964,446	-		BWI76_RS19080	0.86	-0.7
3,964,461	-		BWI76_RS19080	0.87	-0.7
3,964,472	-		BWI76_RS19080	0.88	-0.6
3,964,489	-		BWI76_RS19080	0.88	+0.1
3,964,553	-				-0.3
3,964,555	+				-0.4
3,964,563	-				+1.0
3,964,563	-				-0.2
3,964,631	-				-1.5
3,964,771	+				+0.0
3,964,777	-				-0.3
3,964,779	-				+0.0
3,964,781	+				-0.4
3,964,781	+				+0.0
3,964,789	-				-0.7
3,964,789	-				-0.6
3,964,789	-				-1.0
3,964,789	-				-0.3
3,964,789	-				-0.2
3,964,789	-				-0.4
3,964,789	-				-0.5
3,964,789	-				-0.2
3,964,789	-				-0.7
3,964,789	-				+0.1
3,964,789	-				-0.6
3,964,789	-				-0.3
3,964,789	-				-0.5
3,964,789	-				+0.1
3,964,789	-				-0.6
3,964,789	-				-0.5
3,964,789	-				-0.6
3,964,789	-				-0.3
3,964,789	-				-0.4
3,964,789	-				-1.3
3,964,789	-				+0.0
3,964,849	-		BWI76_RS19085	0.21	-0.4
3,964,853	-		BWI76_RS19085	0.22	-0.5
3,964,854	-		BWI76_RS19085	0.22	-0.6
3,964,854	-		BWI76_RS19085	0.22	-0.1
3,964,859	-		BWI76_RS19085	0.23	-0.6
3,964,864	+		BWI76_RS19085	0.25	-0.8
3,964,904	-		BWI76_RS19085	0.34	-1.2
3,964,909	-		BWI76_RS19085	0.35	+0.3
3,964,909	-		BWI76_RS19085	0.35	-0.1
3,964,955	+		BWI76_RS19085	0.46	-0.4
3,964,963	-		BWI76_RS19085	0.47	-0.8
3,964,981	-		BWI76_RS19085	0.51	-0.4
3,964,981	-		BWI76_RS19085	0.51	-0.9
3,964,991	+		BWI76_RS19085	0.54	-0.2
3,964,999	-		BWI76_RS19085	0.56	-0.3
3,964,999	-		BWI76_RS19085	0.56	-0.6
3,965,000	-		BWI76_RS19085	0.56	-0.4
3,965,010	+		BWI76_RS19085	0.58	-0.4
3,965,018	-		BWI76_RS19085	0.60	-0.5
3,965,018	-		BWI76_RS19085	0.60	-0.9
3,965,018	-		BWI76_RS19085	0.60	-1.0
3,965,018	-		BWI76_RS19085	0.60	-0.4
3,965,018	-		BWI76_RS19085	0.60	-0.3
3,965,048	+		BWI76_RS19085	0.67	-0.5
3,965,066	-		BWI76_RS19085	0.71	-0.3
3,965,082	-		BWI76_RS19085	0.75	-0.9
3,965,136	+		BWI76_RS19085	0.87	+0.4
3,965,143	-		BWI76_RS19085	0.89	-0.7
3,965,143	-		BWI76_RS19085	0.89	-2.7
3,965,143	-		BWI76_RS19085	0.89	-1.3
3,965,143	-		BWI76_RS19085	0.89	-0.1
3,965,143	-		BWI76_RS19085	0.89	-0.6
3,965,143	-		BWI76_RS19085	0.89	-0.8
3,965,143	-		BWI76_RS19085	0.89	-0.1
3,965,143	-		BWI76_RS19085	0.89	-0.4
3,965,143	-		BWI76_RS19085	0.89	-0.6
3,965,143	-		BWI76_RS19085	0.89	-0.8
3,965,145	-		BWI76_RS19085	0.89	-1.0
3,965,155	+				+0.7
3,965,161	-				-0.2
3,965,161	-				+0.3
3,965,168	-				-0.0
3,965,270	-				-1.1
3,965,295	+				-0.2
3,965,415	-		BWI76_RS19090	0.20	-0.9
3,965,437	+		BWI76_RS19090	0.22	-0.3
3,965,445	-		BWI76_RS19090	0.22	-0.7
3,965,463	+		BWI76_RS19090	0.24	-0.7
3,965,482	+		BWI76_RS19090	0.26	+0.1
3,965,498	+		BWI76_RS19090	0.27	-0.7
3,965,498	+		BWI76_RS19090	0.27	+0.2
3,965,506	-		BWI76_RS19090	0.28	-0.5
3,965,528	+		BWI76_RS19090	0.30	-0.7
3,965,575	+		BWI76_RS19090	0.34	+1.0
3,965,617	+				+0.0
3,965,622	+		BWI76_RS19090	0.38	+0.4
3,965,622	+		BWI76_RS19090	0.38	-0.0
3,965,653	-		BWI76_RS19090	0.41	-0.9
3,965,653	-		BWI76_RS19090	0.41	-0.7
3,965,653	-		BWI76_RS19090	0.41	-0.7
3,965,671	-		BWI76_RS19090	0.42	-0.7
3,965,715	-		BWI76_RS19090	0.46	-0.2
3,965,912	-		BWI76_RS19090	0.63	-0.9
3,965,919	-		BWI76_RS19090	0.64	-1.2
3,965,919	-		BWI76_RS19090	0.64	-0.9
3,965,969	-		BWI76_RS19090	0.68	-1.6
3,965,969	-		BWI76_RS19090	0.68	-1.4
3,965,969	-		BWI76_RS19090	0.68	-1.1
3,965,983	+		BWI76_RS19090	0.69	-1.3
3,966,017	-		BWI76_RS19090	0.72	-0.6
3,966,019	+		BWI76_RS19090	0.73	+1.0
3,966,032	-		BWI76_RS19090	0.74	-0.2
3,966,066	+		BWI76_RS19090	0.77	-0.3
3,966,160	-		BWI76_RS19090	0.85	-1.5
3,966,206	+		BWI76_RS19090	0.89	+1.4
3,966,291	-				-0.5
3,966,295	+				+0.1
3,966,357	-				+0.2
3,966,402	+				+0.1
3,966,538	-				+0.1
3,966,560	+				+1.0
3,966,562	+				-1.2
3,966,568	-				+0.4
3,966,568	-				+0.1
3,966,568	-				-0.1
3,966,591	-				-0.6
3,966,664	+		BWI76_RS19095	0.14	-0.2
3,966,664	+		BWI76_RS19095	0.14	-0.3
3,966,664	+		BWI76_RS19095	0.14	-0.8
3,966,664	+		BWI76_RS19095	0.14	-0.2
3,966,664	+		BWI76_RS19095	0.14	+0.3
3,966,664	+		BWI76_RS19095	0.14	-0.4
3,966,664	+		BWI76_RS19095	0.14	-1.2
3,966,672	-		BWI76_RS19095	0.15	+0.1
3,966,672	-		BWI76_RS19095	0.15	+0.3
3,966,672	-		BWI76_RS19095	0.15	-0.0
3,966,672	-		BWI76_RS19095	0.15	+0.2
3,966,672	-		BWI76_RS19095	0.15	+0.4
3,966,672	-		BWI76_RS19095	0.15	-0.1
3,966,672	-				-0.1
3,966,672	-		BWI76_RS19095	0.15	-0.1
3,966,672	-		BWI76_RS19095	0.15	+0.3
3,966,672	-		BWI76_RS19095	0.15	-0.0
3,966,672	-		BWI76_RS19095	0.15	-0.1
3,966,672	-		BWI76_RS19095	0.15	-0.1
3,966,672	-		BWI76_RS19095	0.15	-0.3
3,966,672	-		BWI76_RS19095	0.15	+0.7
3,966,672	-		BWI76_RS19095	0.15	+0.1
3,966,672	-		BWI76_RS19095	0.15	-0.1
3,966,672	-		BWI76_RS19095	0.15	+0.4
3,966,672	-		BWI76_RS19095	0.15	-0.1
3,966,672	-		BWI76_RS19095	0.15	-0.1
3,966,672	-		BWI76_RS19095	0.15	-0.2
3,966,719	+		BWI76_RS19095	0.18	-0.2
3,966,756	+		BWI76_RS19095	0.21	+1.7
3,966,756	+		BWI76_RS19095	0.21	-0.5
3,966,771	+				+1.0
3,966,820	+		BWI76_RS19095	0.25	-0.2
3,966,828	-		BWI76_RS19095	0.26	-2.1
3,966,828	-		BWI76_RS19095	0.26	+0.4
3,966,828	-		BWI76_RS19095	0.26	-2.2
3,966,828	-		BWI76_RS19095	0.26	+0.1
3,967,176	-		BWI76_RS19095	0.50	-0.0
3,967,266	+		BWI76_RS19095	0.56	-1.7
3,967,285	+		BWI76_RS19095	0.58	-2.4
3,967,290	+		BWI76_RS19095	0.58	-0.2
3,967,293	-		BWI76_RS19095	0.58	+0.5
3,967,298	-		BWI76_RS19095	0.58	-1.0
3,967,298	-		BWI76_RS19095	0.58	-0.2