Experiment: KLEB28 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07945 and BWI76_RS07950 are separated by 77 nucleotides BWI76_RS07950 and BWI76_RS07955 are separated by 199 nucleotides BWI76_RS07955 and BWI76_RS07960 are separated by 155 nucleotides
BWI76_RS07945: BWI76_RS07945 - alkyl hydroperoxide reductase subunit F, at 1,687,980 to 1,689,545
_RS07945
BWI76_RS07950: BWI76_RS07950 - universal stress protein G, at 1,689,623 to 1,690,051
_RS07950
BWI76_RS07955: BWI76_RS07955 - nucleoside diphosphate kinase regulator, at 1,690,251 to 1,690,661
_RS07955
BWI76_RS07960: BWI76_RS07960 - ribonuclease I, at 1,690,817 to 1,691,611
_RS07960
Position (kb)
1690
1691 Strain fitness (log2 ratio)
-1
0
1 at 1689.555 kb on + strand at 1689.576 kb on + strand at 1689.576 kb on + strand at 1689.584 kb on - strand at 1689.596 kb on - strand at 1689.596 kb on - strand at 1689.667 kb on - strand, within BWI76_RS07950 at 1689.791 kb on - strand, within BWI76_RS07950 at 1689.882 kb on - strand, within BWI76_RS07950 at 1689.882 kb on - strand, within BWI76_RS07950 at 1689.937 kb on - strand, within BWI76_RS07950 at 1690.194 kb on - strand at 1690.363 kb on - strand, within BWI76_RS07955 at 1690.482 kb on + strand, within BWI76_RS07955 at 1691.003 kb on - strand, within BWI76_RS07960 at 1691.024 kb on - strand, within BWI76_RS07960 at 1691.291 kb on + strand, within BWI76_RS07960 at 1691.296 kb on + strand, within BWI76_RS07960 at 1691.438 kb on - strand, within BWI76_RS07960 at 1691.558 kb on + strand at 1691.625 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB28 MOI 1 remove 1,689,555 + +0.5 1,689,576 + +0.3 1,689,576 + +0.1 1,689,584 - -0.4 1,689,596 - +0.6 1,689,596 - +0.2 1,689,667 - BWI76_RS07950 0.10 +0.1 1,689,791 - BWI76_RS07950 0.39 -0.5 1,689,882 - BWI76_RS07950 0.60 +0.0 1,689,882 - BWI76_RS07950 0.60 -0.1 1,689,937 - BWI76_RS07950 0.73 +0.4 1,690,194 - +0.0 1,690,363 - BWI76_RS07955 0.27 -0.9 1,690,482 + BWI76_RS07955 0.56 -0.3 1,691,003 - BWI76_RS07960 0.23 -0.2 1,691,024 - BWI76_RS07960 0.26 +0.3 1,691,291 + BWI76_RS07960 0.60 +0.4 1,691,296 + BWI76_RS07960 0.60 -0.1 1,691,438 - BWI76_RS07960 0.78 -0.0 1,691,558 + -0.1 1,691,625 + +0.5
Or see this region's nucleotide sequence